STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48315.1Von Willebrand factor type A domain protein; Pfam: PF00092; InterPro: IPR002035. (538 aa)    
Predicted Functional Partners:
EFG48314.1
Hypothetical protein.
 
  
  0.975
EFG46603.1
ABC transporter, permease protein; COG: COG1178; Pfam: PF00528; InterPro: IPR000515.
  
 
 0.809
EFG48317.1
Toxic anion resistance protein TelA; Pfam: PF05816; InterPro: IPR008863.
 
     0.795
EFG48316.1
Hypothetical protein.
       0.723
EFG47688.1
Hypothetical protein.
   
 0.647
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.581
adh
GroES-like protein; COG: COG1063; Pfam: PF08240,PF00107; InterPro: IPR002085.
   
 
 0.573
ycdO
Imelysin; COG: COG2822; Pfam: PF04302; InterPro: IPR007399.
  
    0.527
EFG46499.1
FTR1 family protein; COG: COG0672; Pfam: PF03239; InterPro: IPR004923.
  
    0.519
EFG47406.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam: PF07992,PF00070; InterPro: IPR013027.
     
 0.508
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.