STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEAcomEA protein; COG: COG1555; Pfam: PF00633; InterPro: IPR004509. (245 aa)    
Predicted Functional Partners:
EFG48281.1
Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG0658; Pfam: PF03772,PF00753; InterPro: IPR004477.
 
  
 0.941
holA
DNA polymerase III, delta subunit; COG: COG1466; Pfam: PF06144; InterPro: IPR005790.
       0.715
EFG48279.1
EDD domain protein, DegV family; Pfam: PF02645; InterPro: IPR003797.
       0.636
EFG48589.1
Acetyltransferase, GNAT family; Pfam: PF00583.
  
    0.604
ugd
Nucleotide sugar dehydrogenase; COG: COG1004; Pfam: PF03721,PF00984,PF03720; InterPro: IPR014028.
       0.551
EFG48283.1
Hypothetical protein.
       0.439
EFG48284.1
Hypothetical protein; InterPro: IPR011991.
       0.439
pilD
Peptidase, A24 family; Pfam: PF01478.
   
  
 0.433
EFG46959.1
Hypothetical protein.
   
  
 0.433
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
      
 0.410
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.