STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soj2CobQ/CobB/MinD/ParA nucleotide binding domain protein; COG: COG1192; Pfam: PF01656; InterPro: IPR002586. (298 aa)    
Predicted Functional Partners:
EFG48049.1
ParB-like protein; COG: COG1475; Pfam: PF02195; InterPro: IPR004437; Belongs to the ParB family.
 
 
 0.993
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.861
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.718
EFG46742.1
ParB-like protein; Pfam: PF02195.
  
 
 0.607
oxaA
Membrane protein insertase, YidC/Oxa1 family; COG: COG0706; Pfam: PF02096; InterPro: IPR001708.
     
 0.600
EFG48046.1
R3H domain protein; COG: COG1847; Pfam: PF01424; InterPro: IPR001374.
       0.600
EFG48044.1
Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.591
EFG48693.1
Hypothetical protein.
  
   0.560
EFG48243.1
Hypothetical protein.
    
   0.530
EFG48172.1
Conserved repeat protein; Pfam: PF00746.
    
   0.530
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.