STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48055.1Hypothetical protein. (707 aa)    
Predicted Functional Partners:
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.935
EFG48056.1
Hydrolase, NUDIX family; COG: COG0494; Pfam: PF00293; InterPro: IPR000086; Belongs to the Nudix hydrolase family.
       0.828
EFG48053.1
Hypothetical protein.
 
     0.781
EFG48415.1
Hypothetical protein.
  
    0.776
EFG47326.1
Distant family protein of PhoU.
  
     0.761
mviN
Integral membrane protein MviN; COG: COG0728; Pfam: PF03023; InterPro: IPR004268.
 
     0.755
EFG48155.1
Hypothetical protein.
  
     0.734
EFG48243.1
Hypothetical protein.
  
    0.669
EFG47931.1
Hypothetical protein.
  
     0.654
EFG48057.1
tRNA adenylyltransferase; COG: COG0617; Pfam: PF01743,PF01966; InterPro: IPR014065; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.645
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.