STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48056.1Hydrolase, NUDIX family; COG: COG0494; Pfam: PF00293; InterPro: IPR000086; Belongs to the Nudix hydrolase family. (146 aa)    
Predicted Functional Partners:
EFG48055.1
Hypothetical protein.
       0.828
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
  
 0.734
mviN
Integral membrane protein MviN; COG: COG0728; Pfam: PF03023; InterPro: IPR004268.
       0.695
EFG46757.1
Hypothetical protein; COG: COG1951; Pfam: PF05681; InterPro: IPR004646; 4.2.1.2.
    
  0.684
EFG48476.1
Hydrolase, NUDIX family; COG: COG0494; Pfam: PF00293,PF00300; InterPro: IPR000086; Belongs to the Nudix hydrolase family.
  
   
 0.664
EFG48057.1
tRNA adenylyltransferase; COG: COG0617; Pfam: PF01743,PF01966; InterPro: IPR014065; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.645
EFG48053.1
Hypothetical protein.
       0.563
EFG47607.1
Hypothetical protein.
  
   
 0.519
EFG48374.1
Hypothetical protein; InterPro: IPR013831.
  
     0.493
trxB
Thioredoxin-disulfide reductase; COG: COG0492; Pfam: PF07992,PF00070; InterPro: IPR005982.
       0.449
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.