STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cseCSensor protein CseC; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594. (415 aa)    
Predicted Functional Partners:
cseB
Transcriptional regulatory protein CseB; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
 
  0.984
EFG47049.1
Hypothetical protein.
 
 0.984
prrA
Response regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
  
  0.924
EFG47235.1
Response regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
  
  0.912
EFG48544.1
Response regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR011991.
  
  0.911
regX
Sensory transduction protein RegX3; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
  
  0.896
EFG46606.1
Response regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001867.
  
  0.892
EFG47522.1
Transcriptional regulatory protein, C-terminal domain protein; COG: COG0745; Pfam: PF00486; InterPro: IPR011991.
  
  0.889
EFG48507.1
Response regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
  
  0.880
glnR
Transcriptional regulatory protein, C-terminal domain protein; COG: COG0745; Pfam: PF00486; InterPro: IPR011991.
  
  0.804
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.