STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48108.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EFG48109.1
Hypothetical protein.
     0.983
EFG48110.1
Redoxin family protein; Pfam: PF08534.
 
    0.950
EFG48113.1
Alkylmercury lyase; Pfam: PF03243; overlaps another CDS with the same product name.
 
     0.868
EFG48111.1
Hypothetical protein.
       0.796
EFG48112.1
Alkylmercury lyase; Pfam: PF03243; overlaps another CDS with the same product name.
       0.694
EFG48107.1
Integrase core domain protein; Pfam: PF00665; InterPro: IPR001584.
 
     0.652
merA
mercury(II) reductase; COG: COG1249; Pfam: PF07992,PF00070,PF02852; InterPro: IPR011796.
 
     0.627
EFG48115.1
Transcriptional regulator, MerR family; COG: COG0789; Pfam: PF00376,PF09278; InterPro: IPR000551.
       0.422
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.