STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prrAResponse regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789. (243 aa)    
Predicted Functional Partners:
EFG48163.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Pfam: PF00512,PF02518; InterPro: IPR003594.
 
  0.983
EFG47049.1
Hypothetical protein.
  
 0.931
cseC
Sensor protein CseC; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
  
  0.924
senX
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594.
 0.909
tcsS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
  0.900
mtrB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
 0.891
phoR
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
 
 0.856
EFG48156.1
Putative monovalent cation/H+ antiporter subunit A; COG: COG1009; Pfam: PF00361,PF04039; InterPro: IPR001750.
   
   0.846
kdpD
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG2205; Pfam: PF02702,PF00582,PF00512,PF02518; InterPro: IPR003852.
  
 0.812
mnhC
Putative monovalent cation/H+ antiporter subunit C; COG: COG1006; Pfam: PF00420; InterPro: IPR001133.
       0.774
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.