STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47966.1Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123. (192 aa)    
Predicted Functional Partners:
EFG47965.1
Hypothetical protein; COG: COG1670; InterPro: IPR016181.
       0.688
cdsA
Phosphatidate cytidylyltransferase; COG: COG0575; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
    
 0.672
EFG47964.1
Hypothetical protein; COG: COG0433; Pfam: PF05872; InterPro: IPR008571.
       0.562
EFG47531.1
Hypothetical protein; COG: COG2267; Pfam: PF00561.
 
  0.490
EFG46793.1
AMP-binding enzyme; Pfam: PF00561,PF00501; InterPro: IPR000873.
  
 0.482
EFG47963.1
Hypothetical protein.
       0.474
crtI
Phytoene desaturase; COG: COG1233; Pfam: PF01593; InterPro: IPR014105.
 
  
 0.469
EFG48402.1
Hypothetical protein.
  
     0.454
glpQ
Glycerophosphodiester phosphodiesterase family protein; COG: COG0584; Pfam: PF03009; InterPro: IPR004129.
 
 
 0.442
EFG48243.1
Hypothetical protein.
  
     0.439
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.