STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47888.1GAF domain protein; Pfam: PF01590,PF00486. (405 aa)    
Predicted Functional Partners:
EFG47887.1
ATP-dependent DNA helicase, RecQ family; COG: COG0514; Pfam: PF00270,PF00271; InterPro: IPR004589.
       0.773
acoA
Dehydrogenase E1 component; COG: COG1071; Pfam: PF00676; InterPro: IPR001017.
 
   
 0.583
acxC
Acetone carboxylase gamma subunit; COG: COG4647; Pfam: PF08882; InterPro: IPR014979.
 
     0.513
acoB
Transketolase, pyridine binding domain protein; COG: COG0022; Pfam: PF02779,PF02780; InterPro: IPR005475.
     
 0.507
acxB
Hydantoinase B/oxoprolinase; COG: COG0146; Pfam: PF02538; InterPro: IPR003692.
 
     0.501
hyuA
Hydantoinase/oxoprolinase; COG: COG0145; Pfam: PF05378,PF01968; InterPro: IPR002821.
 
     0.470
acoC
Putative pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; COG: COG0508; Pfam: PF00364,PF02817,PF00198; InterPro: IPR001078.
     
 0.465
EFG47348.1
Hypothetical protein; COG: COG3564; Pfam: PF05610; InterPro: IPR008497; 5.1.3.2.
 
     0.454
lpdA
Dihydrolipoyl dehydrogenase; COG: COG1249; Pfam: PF07992,PF00070,PF02852; InterPro: IPR006258.
       0.447
aldA
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Pfam: PF00171; InterPro: IPR015590; Belongs to the aldehyde dehydrogenase family.
 
 
   0.420
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.