STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47931.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
EFG46430.1
Hypothetical protein.
 
 0.943
EFG47791.1
Beta-phosphoglucomutase family hydrolase; COG: COG1554; Pfam: PF00702,PF03636,PF03632,PF03633; InterPro: IPR005195.
  
 0.865
murI
Putative glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.778
otsB
Trehalose-phosphatase; COG: COG0380; Pfam: PF00982,PF02358; InterPro: IPR001830.
  
 
 0.775
EFG48479.1
Hypothetical protein.
  
     0.762
EFG47049.1
Hypothetical protein.
  
     0.757
EFG48153.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00746.
  
     0.750
EFG47933.1
Hypothetical protein.
 
     0.727
EFG47737.1
Hypothetical protein.
  
 
  0.720
EFG47865.1
Hypothetical protein.
  
 
  0.693
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.