STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47773.1Membrane protein. (151 aa)    
Predicted Functional Partners:
EFG47772.1
Hypothetical protein; InterPro: IPR002994.
 
     0.810
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
       0.742
EFG47108.1
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.740
copC
Copper resistance protein CopC; Pfam: PF04234; InterPro: IPR007348.
  
    0.729
qcrC
COG: COG2010; Pfam: PF00034.
  
     0.725
guaB3
IMP dehydrogenase family protein; COG: COG0516; Pfam: PF00478; InterPro: IPR001093.
    
  0.702
petA
Rieske [2Fe-2S] domain protein; COG: COG0723; Pfam: PF00355; InterPro: IPR005806.
  
     0.675
EFG48105.1
cytoChrome c oxidase Caa3 assembly factor; COG: COG3336; Pfam: PF05425.
  
     0.658
EFG48522.1
DsbA-like protein; COG: COG1651; Pfam: PF01323; InterPro: IPR012335.
  
     0.648
EFG47755.1
ResB-like protein; COG: COG1333; Pfam: PF05140; InterPro: IPR007816.
  
     0.640
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.