STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47823.1ABC transporter, ATP-binding protein; Pfam: PF00664,PF00005; InterPro: IPR001140. (566 aa)    
Predicted Functional Partners:
EFG47822.1
Peptidase, S9A/B/C family, catalytic domain protein; COG: COG1770; Pfam: PF00326; InterPro: IPR002470.
  
    0.776
cydC
Thiol reductant ABC exporter, CydC subunit; COG: COG4987; Pfam: PF00005; InterPro: IPR014223.
  
 
 
0.733
EFG47819.1
Hypothetical protein.
 
    0.632
EFG47820.1
Hypothetical protein.
 
    0.621
thiF
Molybdopterin biosynthesis protein MoeB; COG: COG0476; Pfam: PF00899,PF05237,PF00581; InterPro: IPR016040.
   
   0.601
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.587
EFG47303.1
ABC transporter, ATP-binding protein; COG: COG4152; Pfam: PF00005; InterPro: IPR003439.
  
     0.574
ftsH3
ATPase, AAA family; COG: COG0464; Pfam: PF00004; InterPro: IPR003959.
   
 0.568
acp
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.567
arsC
Low molecular weight phosphotyrosine protein phosphatase; Pfam: PF01451; InterPro: IPR000106; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.521
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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