STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccsBCytochrome c-type biogenesis protein CcsB; COG: COG0755; Pfam: PF01578; InterPro: IPR002541. (340 aa)    
Predicted Functional Partners:
EFG47755.1
ResB-like protein; COG: COG1333; Pfam: PF05140; InterPro: IPR007816.
 
  
 0.990
EFG47514.1
Tat pathway signal sequence domain protein; Pfam: PF08534; InterPro: IPR012335.
 
  
 0.951
hemD
uroporphyrinogen-III synthase; COG: COG1587; Pfam: PF00590,PF02602; InterPro: IPR003754; Belongs to the precorrin methyltransferase family.
  
    0.948
EFG47756.1
Hypothetical protein; 4.4.1.17.
  
  
 0.886
ccdA2
Cytochrome C biogenesis protein transmembrane region; COG: COG0785; Pfam: PF02683; InterPro: IPR003834.
 
  
 0.765
EFG48685.1
Cytochrome C biogenesis protein transmembrane region; Pfam: PF02683.
  
  
 0.701
EFG47107.1
Cytochrome b/b6 family protein; COG: COG1290; Pfam: PF00033; InterPro: IPR016175.
  
  
 0.641
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; COG: COG0001; Pfam: PF00202; InterPro: IPR004639.
 
  
 0.577
qcrC
COG: COG2010; Pfam: PF00034.
 
  
 0.568
ctaD
Cytochrome c oxidase, subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
  
 0.521
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.