STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lldPTransporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (636 aa)    
Predicted Functional Partners:
iclR
Transcriptional regulator, IclR family, C-terminal domain protein; COG: COG1414; Pfam: PF09339,PF01614; InterPro: IPR014757.
       0.773
EFG47330.1
Iron-sulfur cluster-binding protein; COG: COG1139; Pfam: PF02589; InterPro: IPR004452.
 
  
 0.673
lldD
Dehydrogenase, FMN-dependent; COG: COG1304; Pfam: PF01070; InterPro: IPR013785.
  
  
 0.651
EFG47329.1
Cysteine-rich domain protein; COG: COG0247; Pfam: PF02754; InterPro: IPR004017.
 
  
 0.574
EFG47588.1
Hypothetical protein.
       0.548
EFG47331.1
Hypothetical protein; Pfam: PF02589; InterPro: IPR003741.
 
  
 0.495
ldhD
Putative glycolate oxidase, subunit GlcD; Cytochrome; COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004113.
  
  
 0.481
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.