STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47562.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
thiF
Molybdopterin biosynthesis protein MoeB; COG: COG0476; Pfam: PF00899,PF05237,PF00581; InterPro: IPR016040.
  
 0.756
EFG47561.1
Endoribonuclease L-PSP; COG: COG0251; Pfam: PF01042; InterPro: IPR013813.
  
    0.661
EFG47560.1
Hypothetical protein.
       0.647
EFG47666.1
Hydrolase, NUDIX family; Pfam: PF00293; InterPro: IPR000086.
  
     0.618
ponA
Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001460.
       0.600
acp
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.528
EFG47539.1
ErfK/YbiS/YcfS/YnhG; COG: COG1376; Pfam: PF03734; InterPro: IPR005490.
  
     0.502
arsC
Low molecular weight phosphotyrosine protein phosphatase; Pfam: PF01451; InterPro: IPR000106; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.499
EFG48493.1
Hypothetical protein.
  
    0.498
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.497
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.