STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47494.1Ser/Thr phosphatase family protein; Pfam: PF00149; InterPro: IPR004843. (431 aa)    
Predicted Functional Partners:
EFG47049.1
Hypothetical protein.
  
 
 0.885
ushA
LPXTG-motif cell wall anchor domain protein; COG: COG0737; Pfam: PF00149,PF02872,PF00746; InterPro: IPR006179.
 
 
 0.770
EFG47385.1
Hypothetical protein.
    
 0.756
EFG46485.1
Ankyrin repeat protein; Pfam: PF00023; InterPro: IPR002110.
    
 0.756
amiD2
Putative N-acetylmuramoyl-L-alanine amidase; COG: COG0860; Pfam: PF01471; InterPro: IPR002508.
    
  0.750
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.716
EFG47493.1
Hypothetical protein.
    
  0.551
EFG48709.1
Endonuclease/exonuclease/phosphatase family protein; COG: COG2374; Pfam: PF04886,PF03372; InterPro: IPR005135.
  
  
  0.498
prpD
MmgE/PrpD family protein; COG: COG2079; Pfam: PF03972; InterPro: IPR005656.
  
    0.454
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
       0.449
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.