STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbBABC transporter, ATP-binding protein; COG: COG1134; Pfam: PF00005; InterPro: IPR003593. (263 aa)    
Predicted Functional Partners:
EFG47405.1
ABC-2 type transporter; Pfam: PF01061.
 
 0.999
exoA
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
 
  
 0.768
EFG47232.1
Phosphoribosyl transferase domain protein; Pfam: PF00156.
   
    0.684
EFG47406.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam: PF07992,PF00070; InterPro: IPR013027.
       0.598
EFG46858.1
Glycosyltransferase, group 2 family protein; COG: COG0463; Pfam: PF00535; InterPro: IPR001173.
 
  
 0.590
EFG47401.1
Hypothetical protein.
       0.537
EFG47402.1
Hypothetical protein.
       0.537
xerC
Site-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.532
EFG46433.1
Hypothetical protein.
     
 0.492
EFG47980.1
CsbD-like protein; Pfam: PF05532; InterPro: IPR008462; Belongs to the UPF0337 (CsbD) family.
  
    0.451
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.