STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47405.1ABC-2 type transporter; Pfam: PF01061. (282 aa)    
Predicted Functional Partners:
rfbB
ABC transporter, ATP-binding protein; COG: COG1134; Pfam: PF00005; InterPro: IPR003593.
 
 0.999
exoA
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
 
  
 0.764
EFG46858.1
Glycosyltransferase, group 2 family protein; COG: COG0463; Pfam: PF00535; InterPro: IPR001173.
 
  
 0.651
EFG47406.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam: PF07992,PF00070; InterPro: IPR013027.
       0.598
EFG47433.1
ABC-2 type transporter; Pfam: PF01061; InterPro: IPR013525.
    
  0.557
EFG47401.1
Hypothetical protein.
       0.537
EFG47402.1
Hypothetical protein.
       0.537
cmaS
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COG: COG1083; Pfam: PF02348,PF08282; InterPro: IPR003329.
 
   
 0.499
EFG46433.1
Hypothetical protein.
     
 0.463
EFG47980.1
CsbD-like protein; Pfam: PF05532; InterPro: IPR008462; Belongs to the UPF0337 (CsbD) family.
  
    0.444
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.