STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47289.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
EFG48539.1
Hypothetical protein.
  
     0.673
EFG48535.1
Hypothetical protein.
  
     0.672
EFG47326.1
Distant family protein of PhoU.
  
     0.643
EFG48055.1
Hypothetical protein.
 
     0.626
EFG48537.1
Hypothetical protein.
  
     0.622
EFG47444.1
Hypothetical protein.
  
     0.577
rsrA
Mycothiol system anti-sigma-R factor; InterPro: IPR014295.
  
     0.568
EFG48415.1
Hypothetical protein.
  
     0.566
EFG46854.1
Hypothetical protein.
  
     0.548
EFG46859.1
Hypothetical protein.
  
     0.535
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.