STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47180.1Transcriptional regulator, ArsR family; COG: COG0640; Pfam: PF01022; InterPro: IPR011991. (119 aa)    
Predicted Functional Partners:
cadA-2
Cadmium-exporting ATPase; COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757.
 
    0.847
EFG47179.1
Hypothetical protein; COG: COG2141; Pfam: PF00296; InterPro: IPR011251; 1.14.14.3.
       0.550
arsC
Low molecular weight phosphotyrosine protein phosphatase; Pfam: PF01451; InterPro: IPR000106; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.470
EFG47689.1
Hypothetical protein; Pfam: PF03413.
  
     0.435
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.