STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47220.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG3920; Pfam: PF08448,PF07568,PF02518; InterPro: IPR003594. (488 aa)    
Predicted Functional Partners:
EFG47742.1
Response regulator receiver domain protein; COG: COG3707; Pfam: PF00072,PF03861; InterPro: IPR001789.
 
   
 0.855
gdh
Bacterial NAD-glutamate dehydrogenase; COG: COG2902; Pfam: PF05088; InterPro: IPR007780.
       0.828
EFG47049.1
Hypothetical protein.
    
 0.744
EFG47222.1
Hypothetical protein.
       0.608
EFG46397.1
Hypothetical protein.
  
     0.579
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.547
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.484
EFG47114.1
Hypothetical protein.
  
     0.465
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.438
EFG46895.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.