STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47238.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
EFG47241.1
Hypothetical protein; COG: COG1721; Pfam: PF01882; InterPro: IPR002881.
 
    0.960
EFG47239.1
Hypothetical protein.
 
     0.959
EFG47237.1
Hypothetical protein.
 
     0.956
EFG47240.1
ATPase family associated with various cellular activities (AAA); COG: COG0714; Pfam: PF07726; InterPro: IPR011703.
       0.788
EFG47243.1
RDD family protein; COG: COG1714; Pfam: PF06271; InterPro: IPR010432.
 
    0.772
EFG47242.1
Membrane protein; COG: COG1300; Pfam: PF01944; InterPro: IPR002798.
 
    0.767
EFG47233.1
Putative lipoprotein LpqB.
 
     0.654
mtrB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
       0.551
EFG47232.1
Phosphoribosyl transferase domain protein; Pfam: PF00156.
       0.523
EFG47236.1
Hypothetical protein.
       0.518
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.