STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47045.1Hypothetical protein; Pfam: PF03061; 1.1.1.35. (164 aa)    
Predicted Functional Partners:
fabD
Putative [acyl-carrier-protein] S-malonyltransferase; COG: COG0331; Pfam: PF00698; InterPro: IPR001227.
  
 0.755
acp
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.676
EFG47044.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR001647.
  
    0.636
EFG47046.1
Hypothetical protein.
  
    0.523
EFG47043.1
Hypothetical protein.
       0.455
EFG47429.1
Hypothetical protein; COG: COG1853; InterPro: IPR012349.
  
     0.425
EFG46488.1
Thioesterase family protein; COG: COG1607; Pfam: PF03061; InterPro: IPR006683.
  
 
 0.419
EFG46498.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250; Pfam: PF02737,PF00725; InterPro: IPR016040.
 
  
  0.414
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.