STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47049.1Hypothetical protein. (408 aa)    
Predicted Functional Partners:
EFG48635.1
Hypothetical protein.
 
 
 0.993
EFG47525.1
Hypothetical protein.
 
 0.991
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
   
 0.987
cseC
Sensor protein CseC; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
 
 0.984
EFG48163.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Pfam: PF00512,PF02518; InterPro: IPR003594.
 
 0.984
tcsS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
  
 0.980
kdpD
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG2205; Pfam: PF02702,PF00582,PF00512,PF02518; InterPro: IPR003852.
  
 0.965
EFG46951.1
Hypothetical protein.
  
 0.957
glnR
Transcriptional regulatory protein, C-terminal domain protein; COG: COG0745; Pfam: PF00486; InterPro: IPR011991.
  
 0.931
regX
Sensory transduction protein RegX3; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
  
 0.931
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.