STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47059.1Oxidoreductase, aldo/keto reductase family protein; COG: COG0667; Pfam: PF00248; InterPro: IPR001395. (298 aa)    
Predicted Functional Partners:
dkgB
Oxidoreductase, aldo/keto reductase family protein; COG: COG0656; Pfam: PF00248; InterPro: IPR001395.
 
 0.749
EFG46527.1
Protein phosphatase 2C; COG: COG0631; Pfam: PF00481; InterPro: IPR001932.
    
   0.654
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
    0.641
EFG46941.1
TIGR02687 family protein; Pfam: PF08665; InterPro: IPR014060.
    
   0.636
ppi
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.636
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
   0.618
dnaJ3
DnaJ domain protein; COG: COG0484; Pfam: PF00226,PF00684; InterPro: IPR015609.
    
   0.615
dnaJ2
DnaJ domain protein; COG: COG0484; Pfam: PF01556; InterPro: IPR002939.
    
   0.615
dnaJ
DnaJ domain protein; COG: COG0484; Pfam: PF00226,PF01556; InterPro: IPR015609.
    
   0.615
lldD
Dehydrogenase, FMN-dependent; COG: COG1304; Pfam: PF01070; InterPro: IPR013785.
  
 
 
 0.602
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.