STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47100.1Hypothetical protein; 3.1.1.23. (200 aa)    
Predicted Functional Partners:
EFG47101.1
Hypothetical protein.
       0.807
EFG47099.1
Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123.
       0.589
EFG47102.1
GIY-YIG catalytic domain protein; COG: COG0322; Pfam: PF00929,PF01541; InterPro: IPR006054.
       0.549
EFG47838.1
Hypothetical protein.
  
     0.432
EFG48427.1
RNB-like protein; COG: COG0557; Pfam: PF00773; InterPro: IPR001900.
  
    0.429
EFG47279.1
TIGR01906 family protein; Pfam: PF07314; InterPro: IPR010178.
  
     0.417
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.