STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxBCytochrome c oxidase, subunit II; COG: COG1622; Pfam: PF00116; InterPro: IPR014222. (314 aa)    
Predicted Functional Partners:
ctaE
Cytochrome c oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298.
 
 0.999
qcrC
COG: COG2010; Pfam: PF00034.
 
 0.999
petA
Rieske [2Fe-2S] domain protein; COG: COG0723; Pfam: PF00355; InterPro: IPR005806.
 
 
 0.999
EFG47107.1
Cytochrome b/b6 family protein; COG: COG1290; Pfam: PF00033; InterPro: IPR016175.
 
 0.999
EFG47108.1
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
 
 0.999
ctaD
Cytochrome c oxidase, subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.999
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.997
pepR
Peptidase, M16 family; COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237; Belongs to the peptidase M16 family.
   
 
 0.994
EFG48167.1
Hypothetical protein; Pfam: PF04314; InterPro: IPR007410.
  
   0.976
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
  
  
 0.944
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.