STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadA-3Cadmium-exporting ATPase; COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757. (618 aa)    
Predicted Functional Partners:
copZ
Heavy metal-associated domain protein; Pfam: PF00403; InterPro: IPR006122.
 
   0.647
copP
Heavy metal-associated domain protein; Pfam: PF00403; InterPro: IPR006121.
  
 
 0.608
EFG47288.1
Heavy metal-associated domain protein; Pfam: PF00403; InterPro: IPR006121.
  
 
 0.608
EFG46609.1
Hypothetical protein.
   
   0.587
tetR
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR012287.
       0.572
EFG47136.1
MOSC domain protein; COG: COG2258; Pfam: PF03473; InterPro: IPR015808.
       0.473
EFG47287.1
Heavy metal-associated domain protein; COG: COG2217; Pfam: PF00403,PF00122; InterPro: IPR001757.
 
     0.472
EFG47139.1
Drug resistance MFS transporter, drug:H+ antiporter-2 family; Pfam: PF07690; InterPro: IPR004638; Belongs to the major facilitator superfamily.
       0.455
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.