STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuOHeme oxygenase; COG: COG5398; Pfam: PF01126; InterPro: IPR002051. (218 aa)    
Predicted Functional Partners:
ftn
Ferritin-like protein; Iron-storage protein.
    
 0.924
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.904
hmuT
Periplasmic binding protein; COG: COG4558; Pfam: PF01497; InterPro: IPR002491.
 
  
 0.733
EFG47144.1
ABC transporter, ATP-binding protein; COG: COG4559; Pfam: PF00005; InterPro: IPR003593.
 
     0.668
ideR
Iron dependent repressor DNA binding domain protein; COG: COG1321; Pfam: PF01325,PF02742; InterPro: IPR001367.
      
 0.647
hmuU
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.626
EFG47141.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00746.
 
     0.622
EFG47145.1
Hypothetical protein.
       0.605
EFG47146.1
Hypothetical protein.
       0.596
EFG47319.1
Hypothetical protein; Pfam: PF07512; InterPro: IPR011091.
    
 
 0.590
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.