STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46905.1Putative TIGR02611 family protein. (96 aa)    
Predicted Functional Partners:
crgA
Hypothetical protein; Involved in cell division; Belongs to the CrgA family.
  
     0.525
EFG47549.1
TIGR03085 family protein.
  
     0.524
EFG47091.1
Endonuclease/exonuclease/phosphatase family protein; Pfam: PF03372.
  
     0.452
EFG47739.1
Methyltransferase domain protein; COG: COG0500; Pfam: PF08241; InterPro: IPR013216.
  
     0.442
EFG48002.1
Antibiotic biosynthesis monooxygenase; COG: COG2329; Pfam: PF03992; InterPro: IPR007138.
  
     0.417
ndvA2
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140.
  
 
   0.415
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.