STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46938.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
EFG48362.1
Hypothetical protein; Pfam: PF01420.
  
    0.612
hsdR1
Type I restriction enzyme HsdR protein N-terminal domain protein; COG: COG0610; Pfam: PF04313,PF04851.
  
    0.573
EFG46725.1
Hypothetical protein; InterPro: IPR016040.
   
    0.541
EFG46992.1
Hypothetical protein.
  
    0.540
EFG46943.1
Hypothetical protein.
  
    0.485
lon
TIGR02688 family protein; COG: COG4930; InterPro: IPR014061.
       0.446
EFG46942.1
Hypothetical protein.
       0.441
EFG46939.1
Hypothetical protein.
       0.437
EFG46941.1
TIGR02687 family protein; Pfam: PF08665; InterPro: IPR014060.
       0.425
EFG46944.1
Hypothetical protein.
       0.417
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.