STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46842.1Hypothetical protein; COG: COG2951. (305 aa)    
Predicted Functional Partners:
EFG46843.1
Hypothetical protein.
       0.773
EFG46845.1
Anchored repeat-type ABC transporter, ATP-binding subunit; COG: COG1121; Pfam: PF00005; InterPro: IPR003593.
       0.693
EFG46846.1
Actinobacterial surface-anchored domain protein.
       0.683
EFG46847.1
Anchored repeat ABC transporter, substrate-binding protein; COG: COG0803; Pfam: PF01297; InterPro: IPR006127; Belongs to the bacterial solute-binding protein 9 family.
       0.683
EFG46848.1
Putative ABC transporter-associated repeat protein; Pfam: PF00746.
       0.683
EFG46844.1
Anchored repeat-type ABC transporter, permease subunit; COG: COG1108; Pfam: PF00950; InterPro: IPR001626.
       0.682
EFG46841.1
RNA pseudouridine synthase; COG: COG0564; Pfam: PF00849; InterPro: IPR006145.
       0.558
EFG47314.1
TQXA domain protein; Similar to gram-positive cocci surface protein; Pfam: PF00746.
  
     0.429
groL-2
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.406
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.