STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cspN-acetylmuramoyl-L-alanine amidase; COG: COG5479; Pfam: PF01510,PF08310; InterPro: IPR002502. (588 aa)    
Predicted Functional Partners:
EFG46776.1
N-acetylglucosaminylphosphatidylinositol deacetylase; COG: COG2120; Pfam: PF02585; InterPro: IPR003737.
 
    0.801
EFG46773.1
Diacylglycerol kinase catalytic domain protein; Pfam: PF00781.
    
  0.603
EFG46774.1
NlpC/P60 family protein; COG: COG0791; Pfam: PF00877; InterPro: IPR000064.
  
    0.522
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.