STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; COG: COG0575; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family. (318 aa)    
Predicted Functional Partners:
EFG47099.1
Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123.
    
 0.977
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG: COG0558; Pfam: PF01066; InterPro: IPR004570; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.973
plsC
Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123.
    
 0.947
EFG46910.1
CDP-alcohol phosphatidyltransferase; COG: COG0558; Pfam: PF01066; InterPro: IPR000462; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.925
pgsA2
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG: COG0558; Pfam: PF01066; InterPro: IPR000462; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.914
EFG46437.1
Lipid kinase, YegS/Rv2252/BmrU family; COG: COG1597; Pfam: PF00781; InterPro: IPR005218.
    
 0.893
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
  
 0.843
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.786
uppS
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.764
EFG47975.1
PAP2 family protein; Pfam: PF01569; InterPro: IPR000326.
     
 0.761
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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