STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46623.1Hypothetical protein; Pfam: PF06032; InterPro: IPR010318. (326 aa)    
Predicted Functional Partners:
EFG46626.1
Hydantoinase/oxoprolinase; COG: COG0145; Pfam: PF05378,PF01968; InterPro: IPR002821.
 
    0.878
EFG46627.1
Permease, cytosine/purine, uracil, thiamine, allantoin family; COG: COG1457; Pfam: PF02133.
 
     0.876
EFG46624.1
Hypothetical protein; COG: COG3535; Pfam: PF06032; InterPro: IPR010318.
 
     0.873
EFG46622.1
Hypothetical protein.
 
     0.853
EFG46625.1
Hypothetical protein; COG: COG3535; Pfam: PF06032; InterPro: IPR010318.
 
    
0.621
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.