STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46576.1FCD domain protein; COG: COG2186; Pfam: PF00392,PF07729; InterPro: IPR011711. (229 aa)    
Predicted Functional Partners:
glnA-2
Glutamate--ammonia ligase, catalytic domain protein; COG: COG0174; Pfam: PF03951,PF00120; InterPro: IPR014746; Belongs to the glutamine synthetase family.
 
  
 0.876
fabG6
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR002198.
 
 
  0.736
eat
Ethanolamine permease; COG: COG0531; Pfam: PF00324; InterPro: IPR004757.
 
     0.704
puuD
Peptidase C26; COG: COG2071; Pfam: PF07722; InterPro: IPR011697.
 
     0.640
accD
Putative acetyl-CoA carboxylase, carboxyl transferase, beta subunit; COG: COG0777; Pfam: PF01039; InterPro: IPR000022.
  
  
 0.607
EFG47428.1
Transcriptional regulator, GntR family; COG: COG1802; Pfam: PF00392,PF07729; InterPro: IPR000524.
 
  
 0.585
feaB
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Pfam: PF00171; InterPro: IPR015590; Belongs to the aldehyde dehydrogenase family.
 
  
  0.582
EFG47939.1
IclR helix-turn-helix domain protein; COG: COG1414; Pfam: PF09339,PF01614; InterPro: IPR014757.
  
  
 0.447
EFG47319.1
Hypothetical protein; Pfam: PF07512; InterPro: IPR011091.
    
  0.417
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.