STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46481.1Actinobacterial surface-anchored domain protein; COG: COG3464; Pfam: PF00746. (810 aa)    
Predicted Functional Partners:
EFG47655.1
Actinobacterial surface-anchored domain protein.
 
     0.975
EFG46480.1
Transposase; COG: COG3464; Pfam: PF01610; InterPro: IPR002560.
     0.949
EFG46991.1
Hypothetical protein.
  
     0.607
EFG46847.1
Anchored repeat ABC transporter, substrate-binding protein; COG: COG0803; Pfam: PF01297; InterPro: IPR006127; Belongs to the bacterial solute-binding protein 9 family.
 
     0.466
EFG46770.1
Hypothetical protein.
  
     0.453
tcsS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
  
     0.445
EFG46478.1
DNA-binding helix-turn-helix protein; COG: COG3655; Pfam: PF01381.
       0.445
EFG46479.1
Hypothetical protein.
       0.435
EFG46788.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00746.
  
     0.415
EFG48695.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.