STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46511.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
EFG46512.1
Hypothetical protein.
 
     0.954
EFG47420.1
Hypothetical protein.
  
     0.674
amiE
Amidase; COG: COG0154; Pfam: PF01425; InterPro: IPR000120.
 
     0.668
hipO
Amidohydrolase; COG: COG1473; Pfam: PF01546,PF07687; InterPro: IPR010168.
       0.595
EFG47370.1
Hypothetical protein.
  
     0.577
EFG46716.1
Hypothetical protein.
  
     0.555
EFG47838.1
Hypothetical protein.
  
     0.532
EFG48479.1
Hypothetical protein.
  
     0.513
fadE
acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960; Pfam: PF02770,PF00441; InterPro: IPR013764.
       0.505
EFG46881.1
Dicarboxylate carrier MatC domain protein; Pfam: PF07158; InterPro: IPR009827.
  
     0.486
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.