STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdAPenicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF00905; InterPro: IPR001460. (489 aa)    
Predicted Functional Partners:
ftsW-2
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
 
 0.999
ftsW
Cell division protein FtsW; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
 
 0.944
EFG46528.1
FHA domain protein; COG: COG1716; Pfam: PF00498; InterPro: IPR000253; overlaps another CDS with the same product name.
 
   
 0.943
EFG46527.1
Protein phosphatase 2C; COG: COG0631; Pfam: PF00481; InterPro: IPR001932.
  
  
 0.940
EFG48189.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460.
  
  
0.935
EFG48197.1
Hypothetical protein.
  
 
 0.928
ponA
Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001460.
  
 
 0.927
EFG46529.1
FHA domain protein; Pfam: PF00498; InterPro: IPR000253; overlaps another CDS with the same product name.
 
   
 0.921
pknA
Kinase domain protein; COG: COG0515; Pfam: PF00069; InterPro: IPR002290.
     
 0.875
pknB
Kinase domain protein; COG: COG0515; Pfam: PF00069,PF03793; InterPro: IPR002290.
 
  
 0.856
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.