STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46366.1Peptidase, S54 family; COG: COG0705; Pfam: PF01694; InterPro: IPR002610. (239 aa)    
Predicted Functional Partners:
EFG48523.1
SPFH/Band 7/PHB domain protein; COG: COG0330; Pfam: PF01145; InterPro: IPR001107.
   
 0.673
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.668
EFG48339.1
Putative twin arginine-targeting protein translocase TatB.
   
 
 0.659
amiD2
Putative N-acetylmuramoyl-L-alanine amidase; COG: COG0860; Pfam: PF01471; InterPro: IPR002508.
  
   0.650
EFG46517.1
Peptidase, S54 family; Pfam: PF01694; InterPro: IPR002610.
      
 0.644
amiD3
N-acetylmuramoyl-L-alanine amidase; COG: COG0860; Pfam: PF01520; InterPro: IPR002508.
  
   0.643
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.575
EFG46363.1
Hypothetical protein; COG: COG2365.
       0.565
EFG46364.1
MazG nucleotide pyrophosphohydrolase domain protein; COG: COG1694; Pfam: PF03819; InterPro: IPR004518.
       0.565
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
       0.475
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.