STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menC-2O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (374 aa)    
Predicted Functional Partners:
menE
Putative O-succinylbenzoic acid--CoA ligase; COG: COG0318; Pfam: PF00501; InterPro: IPR000873.
 
 
  0.915
gltCP2
Peptidase dimerization domain protein; COG: COG0624; Pfam: PF01546,PF07687; InterPro: IPR002933.
 
     0.899
EFG46877.1
Hypothetical protein; COG: COG3375.
 
     0.806
gltCP
Peptidase dimerization domain protein; COG: COG0624; Pfam: PF01546,PF07687; InterPro: IPR002933.
 
     0.746
EFG46793.1
AMP-binding enzyme; Pfam: PF00561,PF00501; InterPro: IPR000873.
  
 
 0.612
catD
Putative 3-oxoadipate enol-lactonase; COG: COG0596; Pfam: PF00561; InterPro: IPR000073.
  
 
 0.605
hpaI
HpcH/HpaI aldolase/citrate lyase family protein; COG: COG3836; Pfam: PF03328; InterPro: IPR015813; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.472
EFG46883.1
Putative ornithine cyclodeaminase; COG: COG2423; Pfam: PF02423; InterPro: IPR003462.
  
  
  0.461
EFG46349.1
Hypothetical protein.
       0.437
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.430
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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