STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
23.m06486Amine oxidase, putative. (1275 aa)    
Predicted Functional Partners:
17.m07949
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.954
17.m07661
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.915
17.m07967
ELM2 domain-containing protein.
   
 0.915
18.m06146
Histone H2A; Belongs to the histone H2A family.
    
 0.892
21.m02974
Histone deacetylase, putative.
   
 0.868
17.m07946
Core histone H2A/H2B/H3/H4 family protein.
    
 0.864
18.m06145
Histone H3; Belongs to the histone H3 family.
    
 0.864
19.m02320
Histone H3; Belongs to the histone H3 family.
    
 0.864
17.m07847
Amidase family protein.
  
 
 0.832
BBOV_IV001910
High mobility group protein-like protein NHP1.
   
 0.828
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.