STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
19.m02284DEAD/DEAH box helicase and helicase conserved C-terminal domain containing protein. (994 aa)    
Predicted Functional Partners:
17.m07423
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.999
17.m07515
Surp module domain containing protein.
   
 0.999
23.m06336
Splicing factor, putative.
   
 0.999
23.m06020
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.999
18.m06355
Splicing factor 3b, subunit 3, 130kD, putative.
   
 0.999
23.m06378
U2 small nuclear ribonucleoprotein A', putative.
    
 0.997
21.m02783
Splicing factor 3B subunit 2.
   
 0.993
19.m02126
Pre-mRNA splicing factor RNA helicase, putative.
  
 0.991
23.m06391
Transcription or splicing factor-like protein, putative.
   
 0.990
21.m02874
WW domain-containing protein.
   
 0.990
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.