STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115373872Uncharacterized LOC115373872. (260 aa)    
Predicted Functional Partners:
ENSMMDP00005020969
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.698
ENSMMDP00005000462
Nerve growth factor a (beta polypeptide).
    
  0.661
LOC115363002
Uncharacterized LOC115363002.
    
  0.661
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.617
ENSMMDP00005034339
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
  0.542
ENSMMDP00005022530
annotation not available
   
 
 0.522
glod4
Glyoxalase domain containing 4.
    
  0.500
LOC115359567
Nerve growth factor-like.
     
 0.496
rpl13a
Ribosomal protein L13a.
   
 
  0.487
LOC115377669
Histone-lysine N-methyltransferase PRDM9-like.
   
 
  0.474
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.