STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sf3b4Splicing factor 3b subunit 4. (403 aa)    
Predicted Functional Partners:
sart1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.999
sf3a2
Splicing factor 3a subunit 2.
   
 0.999
ENSMMDP00005006973
pre-mRNA processing factor 8.
    
 0.999
sf3b2
Splicing factor 3b subunit 2.
   
 0.999
ENSMMDP00005008574
Small nuclear ribonucleoprotein polypeptide A.
    
 0.999
phf5a
PHD finger protein 5A.
    
 0.999
sf3a3
Splicing factor 3a subunit 3.
    
 0.999
ENSMMDP00005017580
Small nuclear ribonucleoprotein 200 (U5).
    
 0.999
sf3b3
Splicing factor 3b subunit 3.
   
 0.999
ENSMMDP00005019744
annotation not available
    
 0.999
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.