STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005011916ADP-ribosylation factor-like 13b. (373 aa)    
Predicted Functional Partners:
inpp5e
Inositol polyphosphate-5-phosphatase E.
     
 0.881
cog8
Component of oligomeric golgi complex 8.
   
 0.870
ENSMMDP00005032272
Intraflagellar transport 88 homolog.
    
 0.857
cog6
Component of oligomeric golgi complex 6.
    
 0.839
ift22
Intraflagellar transport 22.
    
 
 0.826
pde6d
Phosphodiesterase 6D.
     
 0.825
ift46
Intraflagellar transport 46.
    
 
 0.804
ift74
Intraflagellar transport 74.
    
 0.799
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.792
ift81
Intraflagellar transport 81.
    
 
 0.791
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.