STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005024112AVL9 homolog (S. cerevisiase). (604 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.579
rab30
RAB30, member RAS oncogene family.
      
 0.572
LOC115366617
Ras-related protein Rab-33B-like.
      
 0.561
ENSMMDP00005030394
DENN domain containing 10.
      
 0.556
ENSMMDP00005029062
RAB33A, member RAS oncogene family.
      
 0.544
kbtbd2
Kelch repeat and BTB domain containing 2.
      
 0.482
dennd11
DENN domain containing 11.
      
 0.452
LOC115354910
Protein LCHN-like.
      
 0.452
ENSMMDP00005048129
DENN/MADD domain containing 5A.
      
 0.404
dennd5b
DENN domain containing 5B.
      
 0.404
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.