STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115373023Reticulon-4-like. (382 aa)    
Predicted Functional Partners:
ENSMMDP00005021562
Beta-secretase 1.
   
 0.718
bace2
Beta-secretase 2.
   
 0.718
vta1
Vesicle trafficking 1.
    
   0.688
LOC115354721
Receptor expression-enhancing protein 6-like.
    
 
 0.685
ENSMMDP00005029651
Reticulon 4 receptor.
    
 0.648
LOC115359258
Pepsin A-like.
    
  0.642
LOC115355018
Cathepsin E-like.
    
  0.642
ENSMMDP00005022251
Renin.
    
  0.642
LOC115363071
Cathepsin D-like.
    
  0.642
LOC115377782
Pepsin A-like.
    
  0.642
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.