STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115376416Arfaptin-1-like. (343 aa)    
Predicted Functional Partners:
LOC115360503
Uncharacterized LOC115360503.
    
 0.863
arl1
ADP ribosylation factor like GTPase 1.
    
 0.863
ENSMMDP00005015392
ADP-ribosylation factor 6b.
    
 0.643
ENSMMDP00005042466
ADP-ribosylation factor 6a.
    
 0.643
ENSMMDP00005038552
ADP-ribosylation factor-like 15a.
    
 0.603
rab2a
RAB2A, member RAS oncogene family.
   
 0.543
LOC115358911
Cell division control protein 42 homolog.
   
  0.516
ENSMMDP00005004169
annotation not available
   
  0.516
ENSMMDP00005004172
annotation not available
   
  0.516
LOC115374225
Ras-related C3 botulinum toxin substrate 2-like.
   
  0.516
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.